Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKNIEVTCLIEEAPQ---LIAL-DMT--------------D----P---LSTAIFAALDYLGKTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVFDYFDEDLEADLLECLVNRAEMIAHSNPSGL-DAKTCLSENTIK---FIRNI-GFSTVPMH-LNAYLVIADTGIHGHT------------KEAVDKVKSSGE----------AVLP---------FLKE----L--GYLAEASEDAIHKSDSKQLGSLMTKAHQSLKQ-LGVSSLEADHLVEVAIS-CGALGAKMSGGGLGGCIIALVKEKREAERLSQQLEREGAVNTWTEKV |
| 1PIE Chain:A ((48-392)) | ----VEYFFSPGRINLIGEHTDYNGGYVFPASITIGT-TGLARLREDKKVKLYSENFPKLGVIEFDLDEVEKKDGELWSNYVKGMIVMLKGAGYEIDKGFELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLNVPRLELVQLGQKTENDYIGVNSGILDQFAIGFGEVKKAIELDCNTLKYEMVPVELRDYDIVIMNTNKPRALTESKYNERFAETREALKRMQTRLDIQSLGELSNEEFDANTDLIGDETLIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQKQAGVLGARMTGAGFGGCAIALVAHDN-VSAFRKAVGQVYEEVVGYPAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130278 for 2239 contacts (-58.2/contact) +
2D Compatibility (PS) -29774 + (NN) -12516 + (LL) 736
1D Compatibility (HY) -10000 + (ID) 3050
Total energy: -184882.0 ( -82.57 by residue)
QMean score : 0.379
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