Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTIENLI------IAIVKPLISQPDQLTIKIQDGPEFLEYHLDL--DTQDIGRVIG-------KKGRTITA-----IRSIVYSVPTQGKKVRLIIDEKE----------
2KPO Chain:A ((1-110))
MLLYVLIISNDKKLIEEARKMAEKANLELRTVKTEDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKEFSEEGGSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11370 for 550 contacts (-20.7/contact) +
2D Compatibility (PS) -8503 + (NN) -1806 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -24729.0 ( -44.96 by residue)
QMean score : 0.221
(partial model without unconserved sides chains):
PDB file :
Tito_2KPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KPO-query.scw
PDB file :
Tito_Scwrl_2KPO.pdb
: