Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYEKLLERFLTYVKINTRSNPNSTQTPTTQSQVDFALTVLKPEMEAI---GLKDVHYLP---SNGYLVGTLPATSDRLCHKIGFISHMDTAD-FNAENI---TPQIVDYKGGDIELGDSGYILSPKDFPNLNNYHGQTLITTDGKTLLGADDKSGIAEIMTAMEYLASHPEIEHCEIRVGFGPDEEIGI-GADKFDVKD---F-DVDFAYTVDGGPLG----ELQYETFSAAGLELTFE--GRNVHPGTAKNQMINALQLAMDFHSQLPENER-----P---------------------------EQT------------------DGYQGFYHLYDLSGT----------VDQAKSSYIIRDFEEVNFLKRKHLAQDIADNMNEALQSERVKVKLYD-QYYNMKKVIEKDMT-PINIAKEVMEEL-DIKPIIEPIRGGTD-GSKISF----M-GIPTPNLFAGGENMHGRFEFVSLQTMEKAVDVILGIVAKD |
| 3PFE Chain:A ((18-467)) | ---EEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNH-IANWCKSHAPKGMT-LEIVRLKNRTPLLFMEIPGQ---IDDTVLLYGHLDKQPEM-SGWSDDLHPWKPVL--------------------------KNGLLYGRGG----ADDGYSAYASLTAIRALEQQGL-PYPRCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNPP-Y-NAKVDFKIQNGGSKGWN--APLLSDWLAKAASEASMTYYDKPAAYMGEGGTIPFMSMLGEQFPKAQFMITGVLGPH-SNAHGPNEFLHLDMVKKLTSCVSYVLYSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49854 for 2881 contacts (-17.3/contact) +
2D Compatibility (PS) -38939 + (NN) -18961 + (LL) 1124
1D Compatibility (HY) -7200 + (ID) 2750
Total energy: -116580.0 ( -40.47 by residue)
QMean score : 0.426
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