Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------MSKQKVMATLLLSTLVLSLSSPL-VTLAETINPETSLTMATASTESSSEAEKQEKT----------QPTDSETASPSAEG-------SISTEKTEIGTTETSSSNESSSSSSHQSSSNEDAKTSDSASTASTPSTNTTNSSQADSKPGQSTKTELKPEPTLPLVEPKITPAPSQIESVQTNQNASVPALSFDDNLLST-------PISPVTATPFYVEHWSGQDAYSHYLLSHRYGIKAEQLDGYLKSLGIQYDSNRI--NGAKLLQWEKDSGLDVRAIVAIAVLESS----------LGTQGVAKMPGANMFGYGAFDHDSSHASAYNDEEAIMLLTKNTII---KNNNSSFEIQDLKAQKLSSGQLNTVTEGGVYYTDNSGT----------------GKRRAQIMEDLDRWIDQHG-GTPEIPAALKALSTASL--------------ADLPSGFSLSTAVNTASYIASTYPWGECTWYVFNRAKELG---------YTFDPFMGNGGDWQHKAGFETTHSPKVGYAVSFSPGQAGADGTYGHVAIVE----------------------EVKKDGSVLISESNAMGRGIVSYRTFSSAQAAQL----TYVIGHK---------------------------------------------- |
4A2Q Chain:A ((1-791)) | MTADEKRSLQCYRRYIERSLNPVYVLGNMTDWLPDELRERIRKEEERGVSGAAALFLDAVLQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATMLEVDPVALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYYRASELWDKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGESVEKVIEDSDIIVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTIDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFICTEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVLDNRLLIATSVVQCNLVVLYEYSGNVTKMIQVGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38683 for 3765 contacts (10.3/contact) +
2D Compatibility (PS) -52968 + (NN) 5551 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 2950
Total energy: -21284.0 ( -5.65 by residue)
QMean score : 0.098
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