Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATVKTNTDIFEQAWEGFKGVDWKEKASIARFVQANYAPYDGDESFLAGATERSLHIKKVIEETKAHYEETRFP---MDTRVASISELPAGFIDKDSELIFGIQNDELFKLNFMPKGGIRMAETTLKENGYEPDPAVHEIFTKYATTVNDGIFRAYTSNIRRAR-----HAHTVTGLPDAYSRGRIIGVYARLAVYGADYLMQEKVNDWNALNDID------EESIRLREEINLQYQALGEVVKLGDLYGVDVRKPAMNTKEAIQWVNIAFMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTESEIQEFVDDFVLKLRTVKFARTKAYDALYSGDPTFITTSMAGMGADGRHRVTKMDYRFLNTLDNIGNSP----EPNLTVLWSDQLPY-AFRRYCMSMSHKHSSIQYEGVSTMAKE-GYGEMSCISCCVSPLDP-ENEDKRHNLQYFGARVNVMKALLTGLNGGYDDVHKDYKVFDIDPIRDEVLNFDTVKANFEKSLDWLTDTYVDAMNIIHYMTDKYNYEAVQMAFLP----SHVRANMGFGICGFANTVDSLSAIKYATVKPIRDEDGYIYDYETVGDFPRYGEDDDRVDSIAEWLLEAFHGRLAKHKLYKDAEATVSLLTITSNVAYSKQTGNSPVHKGVYLNEDGSVNLSKVEFFSPGANPSNKA-KGGWLQNLNSLSKLDFAHANDGISLTTQVSPRALGKTFDEQVDNLVTVLDGYFEN-----GGQHVNLNVMDLKDVYDKIMNGED----VIVRISGYCVNTKYLTPEQKTELTQRVFHEVLSMDDALTN |
| 3PFL Chain:A ((1-759)) | ----SELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQTEAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAY-----GRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTIRLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLNTLYTM----GPSPEPNMTILWSEKLP-LNFKKFAAKVSIDTSSLQYENDDLMRPDFNN-DDYAIACCVSPMIVG------KQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDK--YSYEASLMA-LHDR-DVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQFGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTIT-SNVVYGKKTG----NTPDGRRAG-------APFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMN-REMLLDAMENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -335072 for 6750 contacts (-49.6/contact) +
2D Compatibility (PS) -77711 + (NN) -28978 + (LL) 1376
1D Compatibility (HY) -46800 + (ID) 15400
Total energy: -502585.0 ( -74.46 by residue)
QMean score : 0.489
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