Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLRRSERMVVISNYLINNPYTLTSLNTFASKYGAAKSSISEDIAIIKKAFEQAQIGDIKTVTGASGGVIFTPTIAEAEAKEIVEELRQRLSENDRILPGGYIYLSDLLSTPKMLQSIGRIVANAYRG--QKIDAVMTVATKGVPLANAVANVLDVPFVIVRRDLKITEGSTV-SVNYASGSS-GRIEKMFLSKRSLKPNSRVLIVDDFLKGGGTVSGMISLLSEFDSTLVGVAVFAENAQ-EQREK----------M-AYKSLLRVSEIDVKNNRVSVEAGNIFD |
| 1QB7 Chain:A ((40-210)) | ----------------------------------------------------------------------------------------------------RFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPFVLMRKADKNA-GLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPFLKAAEKIHSTANSRYKDIKFISLLSDDALTEENCGDSKNYTGPRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125875 for 1159 contacts (-108.6/contact) +
2D Compatibility (PS) -16580 + (NN) -1224 + (LL) 7648
1D Compatibility (HY) -9600 + (ID) 1850
Total energy: -147481.0 ( -127.25 by residue)
QMean score : 0.508
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