Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MTKIALFAGGDLTYFEYDFDYF----VGIDRGSLFLLKNGLSLDMAVGDFDSITEDELLYIKHYCSNIVSASAEKNDTDTELALKTIFKEFPEAQVTVFGAFGGRIDHMMSNIFLPSDTDLEPFMSQIRLKDEQNIVTYLPSGKNQVSRIEGMSYVSFMPESESTLQISGAKYELNKSNYFKKKMYSSNEFMTSPIEVELKDGYLIIIYSKDRG
2OMK Chain:B ((-1-207))
AMINEHYIPQAIILANGEYPAHELPLRLLAEAQFVVCCAANEYISRGHTPDVIIGDGDSLLPEYKKRFSS--------IILQETNDQTKAVHYLQSKGIR-KIAIVGATGKREDHTLGNISLLVEYMRSGM--EVRTVTDYGTFIPVS-DTQSFASYPG-QQVSIINFGAKGLKAEGLFYPLSDFTN--WWQGTLNEAIADEFTIHCTGEYLVFLAY----
General information:
TITO was launched using:
RESULT:
Template:
2OMK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74664 for 1516 contacts (-49.3/contact) +
2D Compatibility (PS) -20370 + (NN) -3790 + (LL) 1168
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -105656.0 ( -69.69 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_2OMK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OMK-query.scw
PDB file :
Tito_Scwrl_2OMK.pdb
: