Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQLNSSFMIGKVEIPHRTVLAPMAGI--------TNSA---FRTIAKEFGAGLVVMEMISEKGLLYNNEKT-----------LHML-H-IDENEHPMSIQLFGGD-----------------------A----------------------EGLKRAADFIQSNTKADIVDINMGC---------PVNKVVKNEAGAKWLRDPEKIYHIVKEVTSVL--DIPLTVKMRTGW------SDSSNAIENALAAESAGVSALAMHGRTREQMY----TGTCDHETLGKVAKAVTSIPFIANGDIRTVHDAKFMIEEIGADAIMVGRGARSNPYIFTQINHFFETGEILPDLPFEKMLDVAEDHLTRLVNLKGETIAVREFRGLAPHYLRGKSGAAKIRGAVSRAETLAEVQELFAGLR |
| 3HGJ Chain:A ((2-336)) | -ALLFTPLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRA-LGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALR-AGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSL-EDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALGVAPEVPPQYQRGF-------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -152341 for 2062 contacts (-73.9/contact) +
2D Compatibility (PS) -25943 + (NN) -6216 + (LL) 4484
1D Compatibility (HY) -8800 + (ID) 2400
Total energy: -191216.0 ( -92.73 by residue)
QMean score : 0.443
|
|
|