Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLRRPVLEDKEEILAMYKEFQKESSSVDGGF-YEPTMHFEDWLDHNLNMELGVGVPDNFVPYIQFVSFDNDNNAIGFLNLRLRLNDTLLEKGGHIGYSIRPRQRGKGYAKEQLKLGIEQAHLKNINEILVTCHVDNDASKSVILANGGVLEDCLHQTERYWIT
2GE3 Chain:A ((8-148))
VTIKPIRAEHVESFHRALDAVSRERK-YLSFLEAPPLEAVRAFVLDMIEN-----------DHPQFVAI-ADGDVIGWCDIRRQDRAT-RAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDAVSIDGH
General information:
TITO was launched using:
RESULT:
Template:
2GE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32540 for 972 contacts (-33.5/contact) +
2D Compatibility (PS) -15459 + (NN) -10466 + (LL) 420
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -62995.0 ( -64.81 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_2GE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GE3-query.scw
PDB file :
Tito_Scwrl_2GE3.pdb
: