Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MITYQEFLSEKDSLSFEVCTQYFQDLVNSLDEVDEYSIIYWKD------FITASLIYSQSRGEWLLLSREEKHAKDDTRTTKHNKFIYTLKI--------YIAYSKQKGYEFPWFESIKDNRKQLGDLACYIAYIYAVNAR
4WT5 Chain:A ((8-157))
IPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWKRWVVLPSWNPVAAIGKGGVAVSFRDRKVLPWDGKEEPLLVVADRVRNVVEADDGYYLVVAENGLKLEKGSDLKAREVK-ESLGMVVLVVRPPRED
General information:
TITO was launched using:
RESULT:
Template:
4WT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68174 for 799 contacts (-85.3/contact) +
2D Compatibility (PS) -12705 + (NN) 4833 + (LL) 176
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -77770.0 ( -97.33 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_4WT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WT5-query.scw
PDB file :
Tito_Scwrl_4WT5.pdb
: