Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVKKHHLAYGAITLVALFSCILAVMVIFKSSQVTTESLSKADKVRVAKKSKMTKATSKSKVEDVKQAPKPSQASNEAPKSSSQSTEANSQQQVTASEEAAVEQAVVTENTPATSQAQQAYAVTETTYRPAQHQTSGQVLSNGNTAGAIGSAAAAQMAAATGVPQSTWEHIIARESNGNPNVANASGASGLFQTMPGWGST----ATV------------QDQVNSAIKAYRAQGLSAWGY |
| 1QSA Chain:A ((451-535)) | ---------------------------------------------------------------------------------------------------------------------------------------------------LAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14710 for 479 contacts (-30.7/contact) +
2D Compatibility (PS) -7024 + (NN) 250 + (LL) 10864
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -13570.0 ( -28.33 by residue)
QMean score : 0.502
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