Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVEGVSLHLIKNQQFKTNHLTFRFSGDFNNK-TVARRSLVAQMLVTANAKYPKVQEFREKLASLYGASLSTKISTKGLVHIVDIDIVFVKNTFTLEQENIVEQIITFLEDMLFSPLISLEQYQTSIFDTE-KKNLIQYLEADIEDNFYSSDLALKSLFYNNKTLRLPKYGTASLVESENSFTAYQEFQKMLKEDQLDIFVVGDFDDYRMIQAF-NR-MAFEPRHKVLAFD-YTQTYENITRSQVEDKDVNQSIMQLAYHLPITYKDEDYFALIVFNGLFGAFAHSLLFTEIREKQGLAYTIGSQFDSFTGLFTIYAGIDKENRERFLKLINKQFNNIKMGRFSSTLLKQTKDILKMNYVLASDNPKVIVDHIYHEHYLDQFHTSALFIDKVDDVTKSDIVSVATKLKLQAFYFLEGN |
| 3CX5 Chain:B ((1-320)) | ------LTVS-ARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRS-ALKLVRESELL-GGTFKSTLDRE----YITLKATFLKD--------DLPYYVNALADVLYKT-----AFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFR-KGLGNPLLY--DGVERVSLQDIKDFADKVYTKENLEVSG-ENVVEADLKRFVDESLLSTLPAGKSLVSKSEPKFFLGEE-NRVR-FI-GDSVAAIGIPVNK----ASLAQYEVLANYLTS----AL----SELSGLISSAKLDKFTDGGLFTLFVRDQ--DSAVVSSNIKKIVADLKK----GKDLSPAINYTKLKNAVQNESVSSPIELNFDAVKDFKLGKFNYVAVGDVSNLPYLDEL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119285 for 2491 contacts (-47.9/contact) +
2D Compatibility (PS) -32949 + (NN) -7310 + (LL) 5216
1D Compatibility (HY) -7200 + (ID) 1950
Total energy: -163478.0 ( -65.63 by residue)
QMean score : 0.378
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