Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRNRWWIILLLFLVFLPKTSFAHAYIVKSSPGENSELKSAPAQVEIEFNEPVEEG---FHYIKVYNSNGDRVDTDKTEIKKDNHHIMTVKLKKNLPKD-VYRAEWN--AVSADGHPVSGVIPFSIGKADGGFSSQKAADSALNPGTAADRAILYTALSLFIGTVFFHLFWYKGKSEQLVKRTRRILTGSIAALGLALLLQLPIQTKANAGGGWGSAFQPGYIRETLFETAGGSIWIIQAALFVLLALSVIPAIRKNRFSSFGYWTAPLIFFFGLLLAKAFTGHAAVVEEKTVGILMDFLHLTSASIWVGGIAALVLLLSKEWRQPDKTLAWETVRRFSPWALTAVGVILFSGLLNGFFIIRSMDSLFHTAYGQALLVKSGLFVFMLVLGAIHFLLTRKQRRTGISRTLKAEWAIGIAVLITAAVFTSLPSPPEPAPEPFYQTKAIENGQSVSLSISPNQPGKNVFELRVTDHNGDPVKNIQQITLTVYKTGLSGSENKSTFTLKEKTKGVFQDQNLSINEKGNWKIKVHGLTGDFNEINIMFTKTN
4ZJG Chain:A ((43-136))----------------------------------------GAATLVLTFSIPLDPDQDFSRVIHVVDKKSGKVD-GAWEL-SDNLKELRLR---HLEPKRDLIVTIGKEVKALNNATFSKDYEKTITTRDIQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 281 -30261 -107.69 -373.59
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -107.69
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_4ZJG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZJG-query.scw
PDB file : Tito_Scwrl_4ZJG.pdb: