Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRARIIYNPTSGREIFKKHLAQVLQKFEQAGYETSTHATTCAGDATHAAKEAALREFDLIIAAGGDGTINEVVNGLAPLD--NRPTLGVIPVGTTNDFARALGIPREDILKAADTVINGVARPIDIGQVNG-QYFINIAGGGRLTELTYDVPSKLKTMLGQLAYYLKGMEMLPSLRPTEVEIEYDGKLFQGEIMLFLVTLTNSVGGFEKLAPDSSLNDGMFDLMILKKANLAEFIRVATMALRGEHINDQHIIYTKANRVKVNVSEKMQLNLDGEYGGMLPGEFVNLYRHIHVVMPKEKAEQLDD
2BON Chain:A ((30-325))-PASLLILNGKSTDNL---PLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEA-LDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRI----------ALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPAL---VSTLKS-DEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLRS-


General information:
TITO was launched using:
RESULT:

Template: 2BON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1733 -203305 -117.31 -718.39
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -117.31
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_2BON.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BON-query.scw
PDB file : Tito_Scwrl_2BON.pdb: