Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQDMILTLQKHWSSQGCVLMQAYDVEKGAGTMSPYTFLRSIGPEPWKVAYVEPSRRPADGRYGENPNRL----YQHHQFQVIIKPSPDNIQEL-YLDSLRALGIDPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECKPVSVEITYGIERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFQLFSTYEKEAIKQMDNGLVH--PAYDYVLKCSHTFNLLDAKGAISVTERTGYI--ARVRNLARKVAKTYYEEREKLGFPMLKGEGSSHE
3IZ3 Chain:D ((1-291))-----MLQQPTGGYTTLE---QFAFTIRNDGTNATPTQFLQLLSYEATENELVKKTIPTPETHLPSARNVPGNVYIEDAITQALFGISAQNVNAHGYFSRLSALALPNTSARLGLDGVIYNSETINIPFYDPAAVANFAATYAKLGNASTPRYRADMIDIYAHVGLELAGTDAERAAGVMPVKRAKFDSWEGSLISLSRDVVNWKI----LAFLIDLCS-LEGEALRAFKTRNRDVFRMMLFIMSTAVAANVVNRKVTKRVDRVLEYIGVNSMRTAGRTATITYDLSRHEFAAKFLQLTFTRWN


General information:
TITO was launched using:
RESULT:

Template: 3IZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1248 -21322 -17.08 -75.61
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain D : 0.68

3D Compatibility (PKB) : -17.08
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.229

(partial model without unconserved sides chains):
PDB file : Tito_3IZ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IZ3-query.scw
PDB file : Tito_Scwrl_3IZ3.pdb: