Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSVLA----RMRVMRHRAWQGL--------------------VLLVLALLLSSCGWRGISN--VAIPGGPGTGPGSYTIYVQMPDTLAIN-GNSRVMVADVWVGSIRAIK--LKNW--VATLTLSLKKDVTLPKNATAKIGQTSLLGSQHVELAAPPDPSPVPLKDGDTIPLKRSSAYPTTEQTLASIATLLRGGGLVNLEGIQQEINAIVTGRADQ---IRAFLGKL--DTFTDELNQQRDDITRAIDSTNRLLAYVGGRSEVLNRVLTDLPPLIKHFADKQELL-INASDAVGRLSQSADQYLSAARGDLHQDLQALQCPLKELRRAAPYLVGALKLILTQPFDVDTVPQLVRGDYMNLSLTLDLTYSAIDNAFLTGTGFSGALRALEQSFGRDPETMIPDIRYTPNPNDAPGGPLVERGNRQC----------- |
| 4WW4 Chain:A ((3-458)) | QISEVRGNTRDHRTAAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGVVVDLIKAHKMAGRGVLLAGGPGTG--KTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAIGLRVRETKDVYEGEVSTLLIGLKSARG-QKLDQKERVQVGDVIYIETNTGAC-RSDAYATEFDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDVANARPDIISMMGQLMKPKMTEITDKLRMEINKVVQKYIN------------QGVAELIPGVL--FIDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGV--QLTDAAVDRVAEHGVRIS--LRYCLQLLAPASILARVNGRTQVDVQDIAEAEELFLDARRSANILTSTGGLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51982 for 2645 contacts (-19.7/contact) +
2D Compatibility (PS) -36511 + (NN) 6789 + (LL) 1012
1D Compatibility (HY) -6000 + (ID) 3550
Total energy: -90242.0 ( -34.12 by residue)
QMean score : 0.122
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