Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------MKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQ---ALVERRPSR-----LRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSAS----MQKIIECGTGDFGA---------------QASLYTSMLVEAYQAAS-VHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK- |
| 3PVT Chain:A ((1-304)) | MRSTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMTVPDPDLHFDTESGHYRFGEIDWQEFNEVINGRGICNQERLDAKRKAWEEGTWVREAALAHAQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6472 for 1388 contacts (-4.7/contact) +
2D Compatibility (PS) -23225 + (NN) -10119 + (LL) 0
1D Compatibility (HY) -400 + (ID) 1450
Total energy: -41666.0 ( -30.02 by residue)
QMean score : 0.186
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