Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL |
| 4DDP Chain:A ((248-447)) | KSVENQMRYAQTQLDKLVFNATFHIWHSGQFGTI-------------NNFRLGRLPSVPVEWNEINAA-WGQTVLLLHALANKMGL--------------------------KFQRYRLVPYGNHS---YLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGTRFCLPYRMDVEKGKIEDTG----GSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32348 for 1567 contacts (-20.6/contact) +
2D Compatibility (PS) -20948 + (NN) -8486 + (LL) 1432
1D Compatibility (HY) -3200 + (ID) 1500
Total energy: -65050.0 ( -41.51 by residue)
QMean score : 0.193
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