Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDDLSLLLNSLNDPQRQAVAA-PLGRQLVLAGAGSGKTRVLVHRIAWLIQVE--------HASPYSILSVTFTNKAAAEMRHRIEQLLGI-------------------------------------NPAGMWVGTFHGLAHRLLRAHWREAGLSENFQILDSDDQ------QRLVKR------------VIRELGL------D---E----------Q--R---------WPA-------RQAQ----WFINGQKDEGLRP-----------------------------Q---HI-----QP-------------GGDLFLATMLKIYEAYEAACARAGVIDFSELLLRALDLWRDH--PGVLEHYQRRFRHILVDEFQDTNAVQYAWLRILAKG--GDSLMVVGDDDQSIYGWRGARIENIQQFSDDFADAEVIRLEQNYRSTASILKAANALIANNQGRLG---KELWT--------------DGEDGESLSLYA--------AFNEHDEARYVVESIESALK---------------GGLARSEIAILYRSNAQSRVLEEALLREKIPYRIY-GGQRFFERAEIKNAMAYLRLLDGRGNDAALERVVNVPARGIGEKTVESIREFARGNDVSMWEAIRLMIANKVLPGRAASALTGFVELIENLSAKVMDMPLHLMTQTVIEQSGLISYHKEEKGEKGQARVENLEELVSAARAFENSEEEEDLTPLQAFLSHASLEAGETQ---------ADAHEDSVQLMTLHSAKGLEFPLVFLVGM-----EEGLFPHKMSLE----------------ESGRLEEERRLAYVGVTRAMQRLVLTYAETRRLYGSETYNKVSRFIREIPPALIQEVRLSNTVSRPYGGTSRSAGGNLFSGAGVPETPFSLGQRVRHALFGEGTILNFEGAGAQARVQVNFESEGSKWLMLGYAKLEAL |
| 1W36 Chain:B ((9-822)) | -----------------DPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEETNSYQLPESLEK-PRHPLFEAIDQLLAEPLSIRDLV-ITRALAEIRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEV--HAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNND-----EHAWDVV--------------------VEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLAT--AGGERRLTDILHISELLQEAGTQ-----LESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVR----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252479 for 4074 contacts (-62.0/contact) +
2D Compatibility (PS) -61969 + (NN) -36700 + (LL) 8644
1D Compatibility (HY) -30400 + (ID) 6400
Total energy: -379304.0 ( -93.10 by residue)
QMean score : 0.463
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