Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
2AOB Chain:B ((5-97))
----------------------------------------------------------PWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDI------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2AOB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26874 for 483 contacts (-55.6/contact) +
2D Compatibility (PS) -10147 + (NN) -6709 + (LL) 6192
1D Compatibility (HY) -13200 + (ID) 4650
Total energy: -55388.0 ( -114.67 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_2AOB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AOB-query.scw
PDB file :
Tito_Scwrl_2AOB.pdb
: