Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELAND-ELILTFGADDVVCTRIYVRE
3FA6 Chain:B ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKVSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELIDTMTADDVVCTKVFVRE
General information:
TITO was launched using:
RESULT:
Template:
3FA6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35666 for 951 contacts (-37.5/contact) +
2D Compatibility (PS) -15082 + (NN) -5847 + (LL) 208
1D Compatibility (HY) -15600 + (ID) 5000
Total energy: -76987.0 ( -80.95 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_3FA6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FA6-query.scw
PDB file :
Tito_Scwrl_3FA6.pdb
: