Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLLLLAASIMAFGSIQVQGNIAQFGEMIRLKTGKRAELSYAFYGCHCGLGGKGSPKDATDRCCVTHDCCYKSLEKSGCGTKLLKYKYSHQGGQITCSANQNSCQKRLCQCDKAAAECFARNKKTYSLKYQFYPNMFCKGKKPKC
1JLT Chain:B ((1-122))
---------------------NLFQFAKMINGKLGAFSVWNYISYGCYCGWGGQGTPKDATDRCCFVHDCCYGRV--RGCNPKLAIYSYSFKKGNIVCG-KNNGCLRDICECDRVAANCFHQNKNTYNKNYKFLSSSRCRQTSEQC
General information:
TITO was launched using:
RESULT:
Template:
1JLT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32247 for 903 contacts (-35.7/contact) +
2D Compatibility (PS) -13393 + (NN) -9033 + (LL) 2692
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -66431.0 ( -73.57 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_1JLT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JLT-query.scw
PDB file :
Tito_Scwrl_1JLT.pdb
: