Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
1DOA Chain:A ((4-188))MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRR----


General information:
TITO was launched using:
RESULT:

Template: 1DOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139805 for 1454 contacts (-96.2/contact) +
2D Compatibility (PS) -20036 + (NN) -12386 + (LL) 448
1D Compatibility (HY) -26400 + (ID) 9250
Total energy: -207429.0 ( -142.66 by residue)
QMean score : 0.769

(partial model without unconserved sides chains):
PDB file : Tito_1DOA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DOA-query.scw
PDB file : Tito_Scwrl_1DOA.pdb: