Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
3RS3 Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3RS3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105686 for 1387 contacts (-76.2/contact) +
2D Compatibility (PS) -17886 + (NN) -1763 + (LL) 488
1D Compatibility (HY) -23200 + (ID) 8300
Total energy: -156347.0 ( -112.72 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_3RS3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RS3-query.scw
PDB file :
Tito_Scwrl_3RS3.pdb
: