Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWQLTSLLLFVATWGISGTPAPLDSVFSSSERAHQVLRIRKRANSFLEELRHSSLERECIEEICDFEEAKEIFQNVDDTLAFWSKHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRMEKKRSHLKRDTEDQEDQVDPRLIDGKMTRRGDSPWQVVLLD-SKKKLACGAVLIHPSWVLTAAHCMDE--------SKKLLVRLGEYDLRRWE-KWELDLDIKEVFVHPNYS-KSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILG---DRQDACEGDSGGPMVASF--HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIRDKEAPQKSWAP |
| 3NXP Chain:A ((162-422)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQ-AGYKGRVTGWGNLKETWTAN---QPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174865 for 1992 contacts (-87.8/contact) +
2D Compatibility (PS) -26186 + (NN) -3681 + (LL) 12620
1D Compatibility (HY) -20400 + (ID) 4950
Total energy: -217462.0 ( -109.17 by residue)
QMean score : 0.257
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