Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIFLIVIALVLSACNSNSSHAKELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKALIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF |
3LEZ Chain:A ((2-257)) | -----------------------SEDLKKLEEEFDVRLGVYAIDTGADKEISYRENERFAYTSTFKPLAVGAVLQTKSDEELEETITYSEEDLVTYSPITEQHVDEGMTLVEIADAAIRYSDNTAGNLLLEAMGGPDELETILRDIGDETIEMDRYETELNEAKPGDIRDTSTAKAMATTLQQYVLEDVLDADRREVLTNMLINNTTGDALIRAGVPDGWTVGDKTGAG-GYGTRNDIGIIWPEGDEEPIVIAIMSSRDEEDADYDDKLIEKATEIVLQE- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -33009 for 2320 contacts (-14.2/contact) +
2D Compatibility (PS) -27869 + (NN) -11472 + (LL) 2620
1D Compatibility (HY) -20000 + (ID) 4500
Total energy: -94230.0 ( -40.62 by residue)
QMean score : 0.742
|
|
|