Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKEWGYADHNGPDHWHELFPNAKGENQSPIELNTKEISHDPSLKPWTAS-YDPG--SAKTILNNGKTCRVVFDDTYDRSMLRGGPLAAPYRLRQFHLHWGSSD-DHGSEHSVDGVKYAAELHLVHWNS-KYNSYATALKHADGIAVVGVFLKIGRE-KGEFQLLLDALDKIKTKGKEAPFNNFNPSCLFPACR-DYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQIAKLRTLYSSAENEPPVPLVRNWRPPQPIKGRIVKASFK |
4LU3 Chain:A ((21-279)) | ---HWTYEGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPST---LYL--GGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFASFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98385 for 2031 contacts (-48.4/contact) +
2D Compatibility (PS) -27439 + (NN) -21330 + (LL) 460
1D Compatibility (HY) -20000 + (ID) 4350
Total energy: -171044.0 ( -84.22 by residue)
QMean score : 0.483
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