Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEWGYAS--H----NGPDHWHELFPNAKGENQSPVELHTKDIRHDPSLQPWSVSY-DGGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLPGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNP-KYNTFKEALKQRDGIAVIGIFLKIGH-ENGEFQIFLDALDKIKTKGKEAPFTKFDPSCLFPAC---RDYWTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPLVSNWRPPQPINNRVVRASFK |
| 3FW3 Chain:A ((5-266)) | ----WCYEVQAESSNCLVPVKWG---GNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLLENK---ASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEK----------PEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQT-VSMKDNVRPLQQLGQRTVIKS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76229 for 1917 contacts (-39.8/contact) +
2D Compatibility (PS) -25967 + (NN) -20347 + (LL) 1916
1D Compatibility (HY) -16400 + (ID) 3800
Total energy: -140827.0 ( -73.46 by residue)
QMean score : 0.619
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