Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGHHGWGYGQ--D----DGPSHWHKLYPIAQGDRQSPINIISSQAVYSPSLQPLELSY-EACMSLSITNNGHSVQVDFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHDVGSEHTVDGKSFPSELHLVHWNAKKYSTFGEAASAPDGLAVVGVFLETG-DEHPSMNRLTDALYMVRFKGTKAQFSCFNPKCLLPAS---RHYWTYPGSLTTPPLSESVTWIVLREPICISERQMGKFRSLLFTSEDDERIHMVNNFRPPQPLKGRVVKASFRA |
3FW3 Chain:A ((5-266)) | ------WCYEVQAESSNCLVPVKWG---GNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLLENK---ASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEK----------PEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQT-VSMKDNVRPLQQLGQRTVIKS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85529 for 1927 contacts (-44.4/contact) +
2D Compatibility (PS) -25711 + (NN) -12550 + (LL) 1264
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -142376.0 ( -73.88 by residue)
QMean score : 0.426
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