Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLV-PPNASRFHVNLLCGEEQGSDAALHFNPRLDT-SEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
2ZHN Chain:A ((13-147))
-PAVPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFS-GNDIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVPFHRVDTISVNGSVQLSYISF-
General information:
TITO was launched using:
RESULT:
Template:
2ZHN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71518 for 985 contacts (-72.6/contact) +
2D Compatibility (PS) -14201 + (NN) -5906 + (LL) 460
1D Compatibility (HY) -12800 + (ID) 2400
Total energy: -106365.0 ( -107.98 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_2ZHN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZHN-query.scw
PDB file :
Tito_Scwrl_2ZHN.pdb
: