Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVSTASTEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVK---------------CDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKILTAQGGMGDNSKEQLLEIVHDLENLSLDQSEHESADKKDKKLQRLNGHDSDEDGASNSSSSQKAAKE |
2HJH Chain:A ((30-327)) | -----LSNFFTIDHFIQKLHT--ARKILVLTGAGVSTSLGIPDFRSSE-GFYSKIKHLGLDDPQDVFNYNIFMHDPSVFYNIANMVLPPEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLELPLCPYCYKKRREYFPERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDI-------------LECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKHA-----EFDLSLLGYCDDIAAMVAQKCGWTIPH-KKWND---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159827 for 2173 contacts (-73.6/contact) +
2D Compatibility (PS) -28024 + (NN) -14099 + (LL) 3896
1D Compatibility (HY) -22800 + (ID) 4450
Total energy: -225304.0 ( -103.68 by residue)
QMean score : 0.355
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