Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APEDKEYQSVEEEMQSTIREHRDGGNAGGIFNRYNVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFINAIIHKGFDERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYLITYQIMKPEAPS
4I9I Chain:D ((9-211))
APEDKEYQSVEEEMQSTIREHRDG-NAGGIFNRYNVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFINAIIHKGFDERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSFLQFSTMKMAHAPPGHHSVIGRP----LAYAEYVIYRGEQAYPEYLITYQIMKPE---
General information:
TITO was launched using:
RESULT:
Template:
4I9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70486 for 1561 contacts (-45.2/contact) +
2D Compatibility (PS) -21770 + (NN) -9641 + (LL) -284
1D Compatibility (HY) -26400 + (ID) 9900
Total energy: -138481.0 ( -88.71 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_4I9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I9I-query.scw
PDB file :
Tito_Scwrl_4I9I.pdb
: