Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGHPQLRLVKALLLLGLNPVSASLQDQHCESLSLASNISGLQCNASVDLIGTCWPRSPAGQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAARVNYSECQEILNEEKKSKVHYHVAVIINYLGHCISLVALLVAFVLFLRLRPGCTHWGDQADGALEVGAPWSGAPFQVRRSIRCLRNIIHWNLISAFILRNATWFVV-QLTM-SPEVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTD----RLRKWMFICIGWGVPFPIIVAWAIGK-LYY---DNEKCWFGKRPGV-----Y----TDYIYQGPMILVLLINFIFLFNIVRILMTKL----------RASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGED-----EVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHRWQDKHSIRARVARAMSIPTSPTRVSFHSIKQSTAV |
| 2Z73 Chain:A ((35-334)) | --------------------------------------------------------------------------------------------------------------------YSLGIFIGICGIIGCGGNGIVIYLFTKTK-----------------------------SLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGE--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -225450 for 2077 contacts (-108.5/contact) +
2D Compatibility (PS) -26723 + (NN) -2268 + (LL) 8144
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: -257797.0 ( -124.12 by residue)
QMean score : 0.225
|
|
|