Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNASCCLPSVQPTLPNGSEHLQAPFFSNQSSSAFCEQVFIKPEVFLSLGIVSLLENILVILAVVRNGNLHSPMYFFLCSLAVADMLVSVSNALETIMIAIVHSDYLTFEDQFIQHMDNIFDSMICISLVASICNLLAIAVDRYVTIFYALRYHSIMTVRKALTLIVAIWVCCGVCGVVFIVYSE---------------SKMVIVCLITMFFAMMLLMGTLYVHMFLFARLHVKRIAALPPA---------------------------------------------------------------------------------------------------------------------------------------------------DGVAPQQHSCMKGAVTITILLGVFIFCWAPFFLHLVLIITCPTNPYCICYTAHFNTYLVLIMCNSVIDPLIYAFRSLELRNTFREILCGCNGMNLG
3V2Y Chain:A ((63-495))-------------------------------------IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSG----ATTYKLTPAQWFLREGSMFVALS---ASVFSLLAIAIERYITMLK--------NNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKT--CDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPL-----


General information:
TITO was launched using:
RESULT:

Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -275793 for 1890 contacts (-145.9/contact) +
2D Compatibility (PS) -27541 + (NN) -15089 + (LL) 3340
1D Compatibility (HY) -26000 + (ID) 3550
Total energy: -344633.0 ( -182.35 by residue)
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_3V2Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V2Y-query.scw
PDB file : Tito_Scwrl_3V2Y.pdb: