Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLIMMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQIRYHTNNYASSSTSLPCQCSSTLMWSDHLER |
1U19 Chain:A ((40-328)) | -----------------------------------------------FSMLAAYMFLLIMLGFPINFLTLYVTVQHKK-----LRTPLNYILLNLAVADLFMVFGGFTTTLYTSL-HGYFVFGP---TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHE-----ETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE----SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSD----------FGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244611 for 2330 contacts (-105.0/contact) +
2D Compatibility (PS) -29523 + (NN) -5625 + (LL) 1736
1D Compatibility (HY) -800 + (ID) 1250
Total energy: -280073.0 ( -120.20 by residue)
QMean score : 0.211
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