Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEKDYHSRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRIHHSTSHRRSHGKSHRRKRTRSVEDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQVLEHLNTTDPNSTFRC--VQMLEWFEHHGHICIVFELLG--LSTY-DFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-TYDDEHHST-LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYV--SRRCKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI |
| 1XO2 Chain:B ((12-305)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS---RETKLTLVFEHVDQDLTTYLDKVPEPG-VP--TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG-LPGEE---------------DWPRDVALPRQAFH---AQPIEKFVTDID---ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -183395 for 2123 contacts (-86.4/contact) +
2D Compatibility (PS) -30004 + (NN) -11683 + (LL) 9508
1D Compatibility (HY) -22400 + (ID) 5250
Total energy: -243224.0 ( -114.57 by residue)
QMean score : 0.429
|
|
|