Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLARLLRGAALAGPGPGLRAAGFSRSFSSDSGSSPASERGVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDF---KDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELE-ELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPPIQVHVTLGNED--LTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERLPVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFRSA |
4E00 Chain:A ((93-404)) | -----------------------------------------------------------------------------YLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADE-----AQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKL----VRYFLDKTLTSRLGIRMLATHHLALHEDKPD-------FVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVP-DVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTA--------------GFGFGLPTSRAYAEYLGGSLQLQSLQGIGTD--VYLRLRHID----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173930 for 2099 contacts (-82.9/contact) +
2D Compatibility (PS) -29277 + (NN) -7461 + (LL) 7672
1D Compatibility (HY) -21600 + (ID) 5450
Total energy: -230046.0 ( -109.60 by residue)
QMean score : 0.472
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