Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALTCSTVYNELMPCLGYVQSG---G---A------------VPRACCSGIKTLVSRARATPDRRAACACLKTVAAAAAGG---PY-----LGRAAGLPGRCGVQPP--FKIDPNVNCNAV
1W2Q Chain:A ((22-121))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV-------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46349 for 435 contacts (-106.5/contact) +
2D Compatibility (PS) -7268 + (NN) -3057 + (LL) 1308
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -58366.0 ( -134.17 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: