Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCSTVYNELMPCLGYVQS---GGA----VRRACCSGIKTLVSRARAKPDRRAACACLKTVAAAAAG--G---------PYLGRAAGLPGKCGVQPPFKIDPNVNCNAV
1HSS Chain:A ((15-104))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIV------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42979 for 402 contacts (-106.9/contact) +
2D Compatibility (PS) -6731 + (NN) -5836 + (LL) 1588
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -59358.0 ( -147.66 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: