Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCNAVQANLYPCVVYVVQ---GG---AI------------PYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYS--SIY-----LKKAAALPGKCGVKLP--YKIDPSTNCNSIK
1W2Q Chain:A ((23-121))
--------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52590 for 416 contacts (-126.4/contact) +
2D Compatibility (PS) -6984 + (NN) 507 + (LL) 1236
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -60131.0 ( -144.55 by residue)
QMean score : 0.091
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: