Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPLGTCGAQLS----QLAPCARYSVPPLPGQALPTPG----PECCSALGSVSRDCACGAIDIINSL----------------------------------PAKCGLPRVS----CQ----
1BEA Chain:? ((5-120))
-----SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31015 for 386 contacts (-80.3/contact) +
2D Compatibility (PS) -6697 + (NN) -2760 + (LL) -156
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -47128.0 ( -122.09 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: