Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDLC----GMTQAELNECLPAVS----KNNPTSPS----LLCCNALKHADYTCLC---------------GYKNSPWLGSF-GVDPKLASSL------PKECDLTNAPT---C-----
1BEA Chain:? ((5-120))
--SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17748 for 380 contacts (-46.7/contact) +
2D Compatibility (PS) -7789 + (NN) -5811 + (LL) 128
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -36070.0 ( -94.92 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: