Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------DGAGECGATP-PDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNI---ADRPVGYKCGDYTLP--------------------------------------------------------
1B3T Chain:A ((1-147))
KGGWFGKHRGQGGSNPKFENIAEGLRALLARSHVERTTDEGTWVAGV------------FVYGGSKTSLYNLRRGTALAIPQ-CRLTPLSRLPFGMAPGPGPQPGPLRESIVCYFMVFLQTHIFAEVLKDAIKDLVMTKPAPTCNIRVTVCSFDDGVDLP
General information:
TITO was launched using:
RESULT:
Template:
1B3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7206 for 361 contacts (-20.0/contact) +
2D Compatibility (PS) -8800 + (NN) -3796 + (LL) 596
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -23306.0 ( -64.56 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_1B3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B3T-query.scw
PDB file :
Tito_Scwrl_1B3T.pdb
: