Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HITCGTVTSTMTQCISYLTNGGPL------PSSCCVAVKSLNQMAQT------------TPDRRQVCECLKSAGKEIK----------GLNIDLVAALPTTCGVSLSYPIGFNT-NCDSISIAV------------------------------------------------------------------------------------ |
| 1YTD Chain:A ((1-389)) | MNVFNTASDEDIKKGLASDVYFERTISAIGDKCNDLRVAMEATVSGPLDTWINFTGLDEVLKLLEGLDVDLYAIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYETAILGFICQASGISTKASKVRLAAGDSPFFSFGIRRMHPAISPMIDRSAYIGGADGVSGILGAKLIDQDPVGTMPHALSIMLGDEEAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSSRRGNFEALIREVRWELALRGRSDIKIMVSGGLDENTVKKL-REAGAEA-FGVGTSISSAKPFDFAMDIVEVNGKPETKRGKMSGRKNVLRCTSCHRIEVVPANVQEKTCICGGSMQNLLVKYLSHGKRTSEYPRPKEIRSRSMKELEYFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32506 for 473 contacts (-68.7/contact) +
2D Compatibility (PS) -9840 + (NN) -2574 + (LL) -168
1D Compatibility (HY) 400 + (ID) 550
Total energy: -45238.0 ( -95.64 by residue)
QMean score : 0.391
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