Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------ALSCGTVSGYVAPCIGYLTQNGPLPR---GCCTGVTNLNNMAR-----------TTPDRQQACRCLVGAANSFP-----TLNAARAAGLPKACGVNIPYKISKSTNCNSVR-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNAAPDLPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -27374 for 406 contacts (-67.4/contact) +
2D Compatibility (PS) -8468 + (NN) -401 + (LL) -224
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -38867.0 ( -95.73 by residue)
QMean score : 0.351
|
|
|