Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APGCDTVDTDLAPCISYLQTG---T---GNP-----------TVQCCSGVKTLAGTAQTTEDRKAICECIKTAAIRVKP----------VANAVKSLPGLCSVTLPFPISIATDCNKIV
1W2Q Chain:A ((22-114))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME----N--TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43523 for 417 contacts (-104.4/contact) +
2D Compatibility (PS) -6592 + (NN) -2187 + (LL) 1284
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -54418.0 ( -130.50 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: