Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSCGTVTGDLAPCIPYLTG---GAG----PTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNIN---N---------LNPGNAAALPGKCNVNIPYKISTTTNCNTIKF
1HSS Chain:A ((15-106))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVVD------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44610 for 404 contacts (-110.4/contact) +
2D Compatibility (PS) -6180 + (NN) 1100 + (LL) 1552
1D Compatibility (HY) -5600 + (ID) 650
Total energy: -54388.0 ( -134.62 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: