Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISCTEAVAAMNPCLPFLIGA----QA-----------SPVAPCCLAVQNVNQEASTKEIRRELCDCFKKAGPAL---GV--------KPDKAKQLPDLCHVQVPVPIDPTIDCSKVTEDIAW
1SM7 Chain:A ((14-101))
--------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI------------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44494 for 410 contacts (-108.5/contact) +
2D Compatibility (PS) -5919 + (NN) 2131 + (LL) 2436
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -48896.0 ( -119.26 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: