Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GITCGMVSSKLAPCIGYLK----GG--P-------------LGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIK----GIN-----YGKAAGLPGMCGVHIPYAISPSTNCNAVH
1W2Q Chain:A ((22-114))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35213 for 392 contacts (-89.8/contact) +
2D Compatibility (PS) -6410 + (NN) 256 + (LL) 1428
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -41739.0 ( -106.48 by residue)
QMean score : 0.138
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: