Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VSCGDAVSALIPCGSFLLGV----GAP-----K-----------PSSECCASAQSLNKLTTTTADRRAVCQCFVKSGPSF----GV-------KPARTKLLPSLCKLNINIPVTPNVDCNK
1PSY Chain:A ((25-118))
-------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVR--------DECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRC------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16160 for 452 contacts (-35.8/contact) +
2D Compatibility (PS) -6397 + (NN) -1817 + (LL) 988
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -25836.0 ( -57.16 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: